BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H09SP1|AL427543
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1270 1625 0.0
>3x_Contig1270
Length = 7505
Score = 1625 bits (808), Expect = 0.0
Identities = 934/977 (95%), Gaps = 5/977 (0%)
Strand = Plus / Minus
Query: 1 gatcctcctgctaaaagagttaaaagagagcga-gttgaatgggaaatggagtcttttct 59
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5014 gatcctcctgctaaaagagttaaaagagagcgaagttgaatgggaaatggagtcttttct 4955
Query: 60 agtatatwgttgagtkatcwttatwtctattctatatcakataccagttttctatctcac 119
||||||| ||||||| ||| |||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 4954 agtatatagttgagtaatcattatatctatactatatcaaataccagttttctatctcac 4895
Query: 120 attatcgttatggkcgttcaatagttgacctactaggtacaatgwaccacagacaacgac 179
|||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4894 attatcgtaatgaacgttcaatagttgacctactaggtacaatgaaccacagacaacgac 4835
Query: 180 cttggtctctggtcctgattgtgccaatgccggckgggtatcgaataadtcacggttaac 239
|||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||
Sbjct: 4834 cttggtctctggtcctgattgtgccaatgccggcaggatatcgaataaatcacggttaac 4775
Query: 240 ttcaacgttcttcgtgaaatgtcctacttgcgatgccaagtcgtaagcktccatgggctt 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4774 ttcaacgttcttcgtgaaatgtcctacttgcgatgccaagtcgtaagcatccatgggctt 4715
Query: 300 gatccatggcnttccttccccagagccaaattcagttcagataactttwtcctggggcct 359
||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||
Sbjct: 4714 aatccatggcattccttccacagagccaaattcagtacagataactttatcctggggcct 4655
Query: 360 tataattggtgatagcgacggttctagagtcttgccgttagtgattgckattacaaacgt 419
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4654 tataattggtgatagcaacggttctagagtcttgccgttagtgattgcaattacaaacgt 4595
Query: 420 caacggctcatctttwctgaacctgaactcggtatcttagtkcttggccaattckacggc 479
||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 4594 caacggctcatctttactgaacctgaactcggtatctaagtacttggccaattcaacggc 4535
Query: 480 tgcgctcccattatgggcgccatcgggraggacaggtgttgttttacggggggagtkatg 539
|||||||||||||||||| |||||| || |||||||| ||||||||||| |||| |||
Sbjct: 4534 tgcgctcccattatgggcaccatcgaaaagaacaggtgtagttttacggggagagtaatg 4475
Query: 540 ataattgatgagttgtkaccgccccggccattctgccgtctgtatcccatccaggatttg 599
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 ataattgatgaattgtaaccgccccggccattctgccgtctgtatcccatccaggatttg 4415
Query: 600 attcgagtcaagttgaatcatcccagttctctgcatatwatctaatatctgtatagcgac 659
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4414 attcgagtcaagttgaatcatcccagttctctgcatataatctaatatctgtatagcgac 4355
Query: 660 ctgaacatttgttacttgatattcaccatttagaggcagctcgctaaggtcgatcggacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4354 ctgaacatttgttacttgatattcaccatttagaggcagctcgctaaggtcgatcggacc 4295
Query: 720 ccaactagatgtaacgacacttttaatggaagtatccggattagtcttgacgatttctgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4294 ccaactagatgtaacgacacttttaatggaagtatccggattagtcttgacgatttctgc 4235
Query: 780 acctactgatctggctttatcttcaacgactcttactacagcatcatcgttagttccgtc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 acctactgatctggctttatcttcaacgactcttactacagcatcatcgttagttccgtc 4175
Query: 840 cactgccacaaagcgggt-ccctcaacaagtatcccagccttctcagctgc-atacttgg 897
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4174 cactgccacaaagcgggtcccctcaacaagtatcccagccttctcagctgcaatacttgg 4115
Query: 898 caaatcattgcmaaggaatgattcatggtctaat-caatcttcgttatgccg-mcacttt 955
||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 4114 caaatcattgccaaggaatgattcatggtctaatccaatcttcgttatgccgcacacttt 4055
Query: 956 attcttgccaggaatga 972
|||||||||||||||||
Sbjct: 4054 attcttgccaggaatga 4038
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3923
Number of Sequences: 1807
Number of extensions: 3923
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)